首 页网站地图RSS订阅高级搜索保留
生物实验网
设为首页
加入收藏
站长信箱
主页|bio资讯 |DNA实验 |PCR实验 |RNA实验 |蛋白实验 |基本实验技术 |生化与免疫技术 |生物信息学 |细胞生物学 |杂交实验 |学科相关 |交叉领域 |
当前位置: 主页>生物信息学>序列分析> 查看文章详细内容
站内资料搜索
热门关键字: dna  EST  r DNA  pcr  抗体  rt pcr  t dna  tail pcr  PCR sscp  cDNA

相关文章
>基因组信息分析
>蛋白质结构预测
>生物信息学的生物学基础
>生物信息学引论
>Mitochondrion and chloro
>Insects相关数据库
>Invertebrates相关数据库
>Bacteria相关数据库
>Viruses相关数据库
>生物信息学所用的方法和技
热点文章
EMBnet 专业节点
Mitochondrion and chloro
Insects相关数据库
Invertebrates相关数据库
Plants相关数据库
Fungi相关数据库
Bacteria相关数据库
Archaea相关数据库
Viruses相关数据库
生物信息学所用的方法和技
系统发生分析
[ 文章来源: | 文章作者: | 发布时间:2006-12-25|  字体: [ ]  

参考文献

1•  Avise JC. 1994. Molecular Markers, Natural and Evolution. New York : Chapman & Hall.

2•  Baxevanis AD, Francis BF. 1998. Bioinformatics: A practical guide to the analysis of gnes and proteins. John Wiley & Sons, New York .

3•  Brocchieri L. 2001. Phylogenetic inferences from molecular sequences: review and critique. Theor. Popul. Biol. 59(1):27-40.

4•  Brown JR, Douady CJ, Italia MJ, et al. 2001. Universal trees based on large combined protein sequence data sets. Net. Genet. 28(3): 281-285.

5•  Brown RH, et al. 1972. The amino acid sequence of cytochrome c from helix aspersa. Biochem. J. 128:971-974.

6•  Cavalli-Sforza LL, Edwards AW. 1967. Phylogenetic analysis. Models and estimation procedures. Am J Hum Genet. 19(3): Suppl 19:233.

7•  Day WHE. 1986. Computational complexity of inferring phylogenies from dissimilarity matrices. Bulletin of Mathematical Biology. 49:461–467.

8•  Estabrook JGF, et al. 1976. An algebraic analysis of cladistic characters. Discrete Mathematics. 16: 141-147.

9•  Feng DF, Doolittle RF. 1996. Progressive alignment of amino acid sequences and construction of phylogenetic trees from them. Methods Enzymoi.266: 368-382.

10•  Felsenstein J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17:368-376.

11•  Felsenstein J. 1988. Phylogenies from molecular sequences: inference and reliability. Annuals Rev. Genetics, 22:521-565.

12•  Felsenstein J. 1996. Inferring phylogenies from protein sequences by parsimony, distance, and likelihood methods. Methods Enzymol. 266:418-27.

13•  Fitch WM, Margoliash E. 1967. Construction of phylogenetic trees. Science. 155: 279-284.

14•  Fitch WM, Margoliash E. 1967. A method for estimating the number of invariant amino acid coding positions in a gene using cytochrome c as a model case. Biochem Genet. 1(1): 65-71.

15•  Fitch WM. 197 6 . Toward defining the course of evolution: minimum change for a specified tree topology. Systematic Zoology. 20: 406–416.

16•  Forst CV, Schulten K. 2001. Phylogenetic Analysis of Metabolic Pathways. J. Mol. Evol. 52(6): 471-489.

17•  Harver PH, Pagel MD. 1991. The comparative Method in Evolutionary Biology. Oxford University press.

18•  Hein J. 1990. Unified approach to alignment and phylogenies. Methods Enzymol. 183 : 626-645.

19•  Hendy MD , Penny D. 1982. Branch and bound algorithms to determine minimal evolutionary trees. Mathematical Biosciences. 60:133–142.

20•  Huelsenbeck JP, Rannala B. 1997. Phylogenetic methods come of age: testing hypotheses in an evolutionary context. Science. 276(5310):227-32.

21•  Kishino H, Hasegawa M. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies. Comput. Appl. Biosci. 10 : 189-191.

22•  Krane DE , Raymer ML. 2002. Fundamental Concepts of Bioinformatics. Benjamin Cummings.

23•  Li WH. 1997. Molecular Evolution. Sunderland , MA : Sinauer Associates.

24•  Lin J, Gerstein M. 2000. Whole-genome Trees Based on the Occurrence of Folds and Orthologs: Implications for Comparing Genomes on Different Levels. Genome Research. 10(6): 808-818.

25•  Lockhart PJ, Steel MA, Hendy MD, Penny D. 1994. Recovering evolutionary trees under a more realistic model of sequence evolution. Mol. Biol. Evol. 11 : 605-612.

26•  Maddison DR. 1991. The discovery and importance of multiple islands of most-parsimonious trees. Systematic Zoology. 40: 315-328.

27•  Pennisi E. 1998. Genome Data Shake Tree of Life. Science. 280(5364): 672-674.

28•  Penny D, Foulds LR, Hendy MD. 1982. Testing the theory of evolution by comparing phylogenetic trees constructed from five different protein sequences. Nature. 297(5863):197-200.

29•  Penny D, Lockhart PJ, Steel MA, Hendy MD. 1994. The role of models in reconstructing evolutionary trees. In Models in Phylogeny Reconstruction, Systematics Association Special Volume 52. Oxford : Clarendon Press, 211-230.

30•  Rzhetsky A, Nei M. 1994. METREE: A program package for inferring and testing minimun-evolution tress. Comput. Appl. Biosci. 10 : 409-412.

31•  Saitou N, Nei M. 1987.The neighbor joining method: a new method for reconstruction phylogenetic trees. Mol. Biol. Evol. 4: 406-425.

32•  Saitou N. 1996. Reconstruction of gene trees from sequence data. In Methods in Enzymology. 266: 427-450.

33•  Snel B, Bork P, Huynen MA. 1999. Genome phylogeny based on gene content. Nat. Genet. 21(1): 108-110.

34•  Suyama M, Bork P. 2001. Evolution of prokaryotic gene order: genome rearrangements in closely related species. Trends in Genetics. 17(1):10-13.

35•  Thompson JD, Higgins DG, Gibson TJ. 1994. Clustal W: Improving the sensitivity of progressive multiple alignment through sequence weighting. Nucl. Acids Res. 22 : 4673-4680.

36•  Thorne JL, Kishino H, Felsenstein J. 1991. An evolutionary model for maximum likelihood alignment of DNA sequences. J. Mol. Evol. 33(2):114-24.

37•  Yang Z, Goldman N, Friday AA. 1995. Maximum likelihood trees form DNA sequences: A peculiar statistical problem. Syst. Biol. 44 : 384-399

38•  Yano T, Hasegawa M, Kishino H. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Molecular Evolution. 22:160-174.

39•  Zmasek CM, Eddy SR. 2001. ATV: display and manipulation of annotated phylogenetic trees. Bioinformatics. 17(4): 383-384.

40•  Zmasek CM, Eddy SR. 2001. A simple algorithm to infer gene duplication and speciation events on a gene tree. Bioinformatics. 17(9): 821-828.

共7页: 上一页 [1] [2] [3] [4] [5] [6] 7 下一页


上一篇:基因组信息分析   下一篇:蛋白质结构预测
设为首页 - 加入收藏 - 关于我们 - 版权申明 - 程序支持 - 联系方式 - 留言薄 - 会员中心
Power by DedeCms